Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 HCG4B-203ENST00000450128 991 ntBASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 AL049840.3-201ENST00000602669 611 ntBASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 AL691432.3-201ENST00000621860 400 ntBASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 AC010507.1-201ENST00000633895 436 ntBASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 AC007064.4-201ENST00000637740 555 ntBASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 AC011477.6-201ENST00000604980 1927 ntBASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
ATP6AP1LQ52LC2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 AC092474.2-201ENST00000424288 719 ntBASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 RHOQP3-201ENST00000437982 621 ntBASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 FAAHP1-202ENST00000446499 1238 ntBASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 RN7SL510P-201ENST00000581311 263 ntBASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 AC023141.13-201ENST00000604991 943 ntBASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 AC116407.3-201ENST00000623905 1129 ntBASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 SSR4P1-203ENST00000599569 2260 ntBASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6AP1LQ52LC2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms