Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USH1GQ495M9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
USH1GQ495M9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.43■□□□□ 0.54
USH1GQ495M9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
USH1GQ495M9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USH1GQ495M9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
USH1GQ495M9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
USH1GQ495M9 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.43■□□□□ 0.54
USH1GQ495M9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.43■□□□□ 0.54
USH1GQ495M9 HAUS4P1-201ENST00000406739 1145 ntBASIC18.43■□□□□ 0.54
USH1GQ495M9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USH1GQ495M9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.43■□□□□ 0.54
USH1GQ495M9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.43■□□□□ 0.54
USH1GQ495M9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.43■□□□□ 0.54
USH1GQ495M9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USH1GQ495M9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.43■□□□□ 0.54
USH1GQ495M9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.43■□□□□ 0.54
USH1GQ495M9 AC025048.3-201ENST00000590609 569 ntBASIC18.43■□□□□ 0.54
USH1GQ495M9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.43■□□□□ 0.54
USH1GQ495M9 AC005702.4-201ENST00000618393 416 ntBASIC18.43■□□□□ 0.54
USH1GQ495M9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
USH1GQ495M9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.43■□□□□ 0.54
USH1GQ495M9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USH1GQ495M9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
USH1GQ495M9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
USH1GQ495M9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
USH1GQ495M9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
USH1GQ495M9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.43■□□□□ 0.54
USH1GQ495M9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USH1GQ495M9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USH1GQ495M9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USH1GQ495M9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USH1GQ495M9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
USH1GQ495M9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
USH1GQ495M9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
USH1GQ495M9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USH1GQ495M9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USH1GQ495M9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USH1GQ495M9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USH1GQ495M9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.42■□□□□ 0.54
USH1GQ495M9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.42■□□□□ 0.54
USH1GQ495M9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USH1GQ495M9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USH1GQ495M9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.42■□□□□ 0.54
USH1GQ495M9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
USH1GQ495M9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USH1GQ495M9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
USH1GQ495M9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USH1GQ495M9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
USH1GQ495M9 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.42■□□□□ 0.54
USH1GQ495M9 FO393414.2-201ENST00000405153 598 ntBASIC18.42■□□□□ 0.54
USH1GQ495M9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
USH1GQ495M9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.42■□□□□ 0.54
USH1GQ495M9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.42■□□□□ 0.54
USH1GQ495M9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USH1GQ495M9 SRD5A3P1-201ENST00000603021 949 ntBASIC18.42■□□□□ 0.54
USH1GQ495M9 AC012645.4-201ENST00000610691 1061 ntBASIC18.42■□□□□ 0.54
USH1GQ495M9 AC025048.6-201ENST00000634326 1161 ntBASIC18.42■□□□□ 0.54
USH1GQ495M9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.42■□□□□ 0.54
USH1GQ495M9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
USH1GQ495M9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.42■□□□□ 0.54
USH1GQ495M9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USH1GQ495M9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
USH1GQ495M9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.41■□□□□ 0.54
USH1GQ495M9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
USH1GQ495M9 AC005034.1-201ENST00000426657 489 ntBASIC18.41■□□□□ 0.54
USH1GQ495M9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
USH1GQ495M9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
USH1GQ495M9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.41■□□□□ 0.54
USH1GQ495M9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USH1GQ495M9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.41■□□□□ 0.54
USH1GQ495M9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.41■□□□□ 0.54
USH1GQ495M9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
USH1GQ495M9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1GQ495M9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms