Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 RPSAP43-201ENST00000402237 625 ntBASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 ACTG1P14-201ENST00000446382 1122 ntBASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 AC068137.2-201ENST00000605408 478 ntBASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.36□□□□□ -0.11
PCGF3Q3KNV8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 KRT8P49-201ENST00000604166 1432 ntBASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 AC006449.6-201ENST00000612330 2296 ntBASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 GGT4P-201ENST00000623672 1708 ntBASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF3Q3KNV8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCGF3Q3KNV8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms