Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 MEP1AP4-201ENST00000423244 1087 ntBASIC21.72■■□□□ 1.07
CGNL1Q0VF96 PHKG1P2-201ENST00000457537 863 ntBASIC21.72■■□□□ 1.07
CGNL1Q0VF96 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 AL450472.2-201ENST00000603663 1156 ntBASIC21.72■■□□□ 1.07
CGNL1Q0VF96 AC099568.2-201ENST00000609194 695 ntBASIC21.72■■□□□ 1.07
CGNL1Q0VF96 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.72■■□□□ 1.07
CGNL1Q0VF96 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 AC006449.5-201ENST00000610658 2098 ntBASIC21.71■■□□□ 1.07
CGNL1Q0VF96 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 AC087499.6-201ENST00000411576 835 ntBASIC21.71■■□□□ 1.07
CGNL1Q0VF96 AC136604.1-201ENST00000418535 575 ntBASIC21.71■■□□□ 1.07
CGNL1Q0VF96 AC007274.1-201ENST00000439805 662 ntBASIC21.71■■□□□ 1.07
CGNL1Q0VF96 HNRNPUP1-201ENST00000554987 333 ntBASIC21.71■■□□□ 1.07
CGNL1Q0VF96 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGNL1Q0VF96 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
CGNL1Q0VF96 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC21.7■■□□□ 1.07
CGNL1Q0VF96 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CGNL1Q0VF96 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.7■■□□□ 1.07
CGNL1Q0VF96 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 AC079328.2-201ENST00000561241 3354 ntBASIC21.7■■□□□ 1.06
CGNL1Q0VF96 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 AC011477.6-201ENST00000604980 1927 ntBASIC21.7■■□□□ 1.06
CGNL1Q0VF96 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 U91328.1-201ENST00000437528 223 ntBASIC21.7■■□□□ 1.06
CGNL1Q0VF96 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 RHOA-206ENST00000454011 889 ntTSL 2 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 TIMM17BP1-201ENST00000545713 516 ntBASIC21.7■■□□□ 1.06
CGNL1Q0VF96 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CGNL1Q0VF96 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC21.69■■□□□ 1.06
CGNL1Q0VF96 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.69■■□□□ 1.06
CGNL1Q0VF96 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CGNL1Q0VF96 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
CGNL1Q0VF96 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC21.69■■□□□ 1.06
CGNL1Q0VF96 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.69■■□□□ 1.06
CGNL1Q0VF96 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms