Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
IRX4P78413 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.86■□□□□ 0.29
IRX4P78413 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.86■□□□□ 0.29
IRX4P78413 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.86■□□□□ 0.29
IRX4P78413 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.86■□□□□ 0.29
IRX4P78413 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.86■□□□□ 0.29
IRX4P78413 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.86■□□□□ 0.29
IRX4P78413 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.86■□□□□ 0.29
IRX4P78413 DUX4L17-201ENST00000557360 1267 ntBASIC16.86■□□□□ 0.29
IRX4P78413 AL135744.1-201ENST00000565098 629 ntBASIC16.86■□□□□ 0.29
IRX4P78413 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.86■□□□□ 0.29
IRX4P78413 AL645728.2-201ENST00000641974 660 ntBASIC16.86■□□□□ 0.29
IRX4P78413 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.86■□□□□ 0.29
IRX4P78413 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
IRX4P78413 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
IRX4P78413 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.86■□□□□ 0.29
IRX4P78413 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.86■□□□□ 0.29
IRX4P78413 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX4P78413 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
IRX4P78413 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
IRX4P78413 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX4P78413 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.85■□□□□ 0.29
IRX4P78413 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
IRX4P78413 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX4P78413 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
IRX4P78413 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX4P78413 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.85■□□□□ 0.29
IRX4P78413 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.85■□□□□ 0.29
IRX4P78413 TREML5P-201ENST00000421694 576 ntBASIC16.85■□□□□ 0.29
IRX4P78413 FAM207CP-201ENST00000443486 507 ntBASIC16.85■□□□□ 0.29
IRX4P78413 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX4P78413 AP002490.2-201ENST00000524791 560 ntBASIC16.85■□□□□ 0.29
IRX4P78413 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.85■□□□□ 0.29
IRX4P78413 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
IRX4P78413 AC140878.1-201ENST00000565277 250 ntBASIC16.85■□□□□ 0.29
IRX4P78413 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.85■□□□□ 0.29
IRX4P78413 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX4P78413 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX4P78413 AL390754.1-201ENST00000619088 582 ntBASIC16.85■□□□□ 0.29
IRX4P78413 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX4P78413 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX4P78413 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX4P78413 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
IRX4P78413 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX4P78413 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX4P78413 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.85■□□□□ 0.29
IRX4P78413 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
IRX4P78413 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
IRX4P78413 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 IGHV3-42-201ENST00000520410 361 ntBASIC16.84■□□□□ 0.29
IRX4P78413 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.84■□□□□ 0.29
IRX4P78413 RARRES2P8-201ENST00000566335 367 ntBASIC16.84■□□□□ 0.29
IRX4P78413 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 AKAP8P1-201ENST00000434743 1349 ntBASIC16.84■□□□□ 0.29
IRX4P78413 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 AC008677.1-201ENST00000519230 1561 ntBASIC16.84■□□□□ 0.29
IRX4P78413 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
IRX4P78413 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms