Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CKS1BP61024 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 VENTXP5-201ENST00000523979 775 ntBASIC11.39□□□□□ -0.59
CKS1BP61024 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.39□□□□□ -0.59
CKS1BP61024 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.39□□□□□ -0.59
CKS1BP61024 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.39□□□□□ -0.59
CKS1BP61024 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.39□□□□□ -0.59
CKS1BP61024 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 LINC00528-201ENST00000600723 2160 ntBASIC11.39□□□□□ -0.59
CKS1BP61024 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 AC027601.5-201ENST00000624065 2482 ntBASIC11.39□□□□□ -0.59
CKS1BP61024 AC073912.3-201ENST00000624414 853 ntBASIC11.39□□□□□ -0.59
CKS1BP61024 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
CKS1BP61024 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 FRMD8P1-201ENST00000440433 1524 ntBASIC11.39□□□□□ -0.59
CKS1BP61024 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CKS1BP61024 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CKS1BP61024 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.39□□□□□ -0.59
CKS1BP61024 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.39□□□□□ -0.59
CKS1BP61024 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.39□□□□□ -0.59
CKS1BP61024 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS1BP61024 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 AC006449.6-201ENST00000612330 2296 ntBASIC11.38□□□□□ -0.59
CKS1BP61024 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CKS1BP61024 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS1BP61024 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
CKS1BP61024 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 AK4P3-201ENST00000418260 669 ntBASIC11.38□□□□□ -0.59
CKS1BP61024 TSPY22P-201ENST00000427496 604 ntBASIC11.38□□□□□ -0.59
CKS1BP61024 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 RNF126P1-202ENST00000569893 925 ntBASIC11.38□□□□□ -0.59
CKS1BP61024 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.38□□□□□ -0.59
CKS1BP61024 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS1BP61024 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS1BP61024 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CKS1BP61024 AL391256.1-201ENST00000443260 1855 ntBASIC11.38□□□□□ -0.59
CKS1BP61024 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CKS1BP61024 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
CKS1BP61024 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS1BP61024 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CKS1BP61024 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS1BP61024 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms