Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN6P56747 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN6P56747 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN6P56747 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CLDN6P56747 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 AL603756.1-201ENST00000606511 2163 ntBASIC15.41■□□□□ 0.06
CLDN6P56747 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN6P56747 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CLDN6P56747 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLDN6P56747 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN6P56747 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLDN6P56747 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN6P56747 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN6P56747 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN6P56747 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN6P56747 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN6P56747 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.4■□□□□ 0.06
CLDN6P56747 AL158212.4-201ENST00000624062 1286 ntBASIC15.4■□□□□ 0.06
CLDN6P56747 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN6P56747 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLDN6P56747 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN6P56747 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLDN6P56747 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN6P56747 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CLDN6P56747 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLDN6P56747 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN6P56747 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CLDN6P56747 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN6P56747 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN6P56747 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN6P56747 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CLDN6P56747 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN6P56747 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN6P56747 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN6P56747 AL359711.2-201ENST00000563105 872 ntBASIC15.39■□□□□ 0.05
CLDN6P56747 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN6P56747 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 KRT8P22-201ENST00000562317 1415 ntBASIC15.39■□□□□ 0.05
CLDN6P56747 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN6P56747 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN6P56747 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN6P56747 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLDN6P56747 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN6P56747 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms