Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.56□□□□□ -0.08
SUMO3P55854 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SUMO3P55854 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
SUMO3P55854 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.56□□□□□ -0.08
SUMO3P55854 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SUMO3P55854 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.56□□□□□ -0.08
SUMO3P55854 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.55□□□□□ -0.08
SUMO3P55854 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.55□□□□□ -0.08
SUMO3P55854 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SUMO3P55854 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SUMO3P55854 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.55□□□□□ -0.08
SUMO3P55854 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.55□□□□□ -0.08
SUMO3P55854 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.55□□□□□ -0.08
SUMO3P55854 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.55□□□□□ -0.08
SUMO3P55854 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.55□□□□□ -0.08
SUMO3P55854 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.55□□□□□ -0.08
SUMO3P55854 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.55□□□□□ -0.08
SUMO3P55854 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.55□□□□□ -0.08
SUMO3P55854 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.55□□□□□ -0.08
SUMO3P55854 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.55□□□□□ -0.08
SUMO3P55854 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.55□□□□□ -0.08
SUMO3P55854 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SUMO3P55854 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SUMO3P55854 AP005117.1-202ENST00000581724 1908 ntBASIC14.54□□□□□ -0.08
SUMO3P55854 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SUMO3P55854 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SUMO3P55854 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.54□□□□□ -0.08
SUMO3P55854 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
SUMO3P55854 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SUMO3P55854 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.54□□□□□ -0.08
SUMO3P55854 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
SUMO3P55854 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SUMO3P55854 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SUMO3P55854 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SUMO3P55854 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SUMO3P55854 AL080243.2-201ENST00000418783 582 ntBASIC14.54□□□□□ -0.08
SUMO3P55854 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.54□□□□□ -0.08
SUMO3P55854 PHKG1P2-201ENST00000457537 863 ntBASIC14.54□□□□□ -0.08
SUMO3P55854 AC069120.2-201ENST00000524091 540 ntBASIC14.54□□□□□ -0.08
SUMO3P55854 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.54□□□□□ -0.08
SUMO3P55854 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SUMO3P55854 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.54□□□□□ -0.08
SUMO3P55854 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.54□□□□□ -0.08
SUMO3P55854 AL158211.3-201ENST00000607385 239 ntBASIC14.54□□□□□ -0.08
SUMO3P55854 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.54□□□□□ -0.08
SUMO3P55854 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.54□□□□□ -0.08
SUMO3P55854 AC073592.8-201ENST00000624126 511 ntBASIC14.54□□□□□ -0.08
SUMO3P55854 FO538757.1-201ENST00000623083 1397 ntBASIC14.54□□□□□ -0.08
SUMO3P55854 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.54□□□□□ -0.08
SUMO3P55854 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SUMO3P55854 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SUMO3P55854 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SUMO3P55854 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SUMO3P55854 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SUMO3P55854 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.54□□□□□ -0.08
SUMO3P55854 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SUMO3P55854 AC010491.1-201ENST00000563101 2797 ntBASIC14.54□□□□□ -0.08
SUMO3P55854 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SUMO3P55854 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SUMO3P55854 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SUMO3P55854 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SUMO3P55854 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SUMO3P55854 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SUMO3P55854 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SUMO3P55854 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SUMO3P55854 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SUMO3P55854 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SUMO3P55854 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.53□□□□□ -0.08
SUMO3P55854 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms