Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH15P55291 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CDH15P55291 AC103564.2-201ENST00000432853 1299 ntBASIC15.12■□□□□ 0.01
CDH15P55291 KRT16P4-201ENST00000453883 522 ntBASIC15.12■□□□□ 0.01
CDH15P55291 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH15P55291 AC106795.1-205ENST00000512851 1056 ntBASIC15.12■□□□□ 0.01
CDH15P55291 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH15P55291 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDH15P55291 AL662844.1-201ENST00000546340 181 ntBASIC15.12■□□□□ 0.01
CDH15P55291 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH15P55291 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.12■□□□□ 0.01
CDH15P55291 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 AL353593.2-201ENST00000602529 1483 ntBASIC15.12■□□□□ 0.01
CDH15P55291 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CDH15P55291 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH15P55291 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH15P55291 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CDH15P55291 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
CDH15P55291 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDH15P55291 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH15P55291 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CDH15P55291 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.11■□□□□ 0.01
CDH15P55291 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDH15P55291 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 NUS1P2-201ENST00000417358 873 ntBASIC15.11■□□□□ 0.01
CDH15P55291 AP000347.1-202ENST00000435868 847 ntBASIC15.11■□□□□ 0.01
CDH15P55291 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH15P55291 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.11■□□□□ 0.01
CDH15P55291 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CDH15P55291 AP005901.3-202ENST00000581653 237 ntBASIC15.11■□□□□ 0.01
CDH15P55291 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.11■□□□□ 0.01
CDH15P55291 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH15P55291 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.11■□□□□ 0.01
CDH15P55291 AC087481.3-201ENST00000602886 1894 ntBASIC15.11■□□□□ 0.01
CDH15P55291 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CDH15P55291 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CDH15P55291 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH15P55291 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH15P55291 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH15P55291 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH15P55291 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH15P55291 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH15P55291 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH15P55291 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDH15P55291 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDH15P55291 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH15P55291 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH15P55291 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH15P55291 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH15P55291 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH15P55291 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms