Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH11P55287 AC079781.4-201ENST00000641908 219 ntBASIC14.84□□□□□ -0.03
CDH11P55287 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH11P55287 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH11P55287 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.84□□□□□ -0.03
CDH11P55287 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDH11P55287 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH11P55287 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH11P55287 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH11P55287 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CDH11P55287 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CDH11P55287 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH11P55287 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH11P55287 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH11P55287 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDH11P55287 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH11P55287 AC013268.4-201ENST00000637413 2228 ntBASIC14.84□□□□□ -0.03
CDH11P55287 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH11P55287 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH11P55287 SLC22A20-204ENST00000530038 1673 ntBASIC14.84□□□□□ -0.03
CDH11P55287 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH11P55287 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH11P55287 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH11P55287 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH11P55287 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDH11P55287 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
CDH11P55287 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.83□□□□□ -0.03
CDH11P55287 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CDH11P55287 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH11P55287 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH11P55287 AL353732.1-201ENST00000569618 1459 ntBASIC14.83□□□□□ -0.03
CDH11P55287 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.83□□□□□ -0.03
CDH11P55287 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDH11P55287 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
CDH11P55287 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDH11P55287 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH11P55287 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH11P55287 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH11P55287 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.83□□□□□ -0.04
CDH11P55287 RPS8P6-201ENST00000426177 609 ntBASIC14.83□□□□□ -0.04
CDH11P55287 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH11P55287 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH11P55287 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH11P55287 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH11P55287 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH11P55287 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH11P55287 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH11P55287 AC020765.3-201ENST00000613051 740 ntBASIC14.83□□□□□ -0.04
CDH11P55287 AC010507.1-201ENST00000633895 436 ntBASIC14.83□□□□□ -0.04
CDH11P55287 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH11P55287 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH11P55287 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH11P55287 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH11P55287 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH11P55287 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH11P55287 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDH11P55287 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH11P55287 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH11P55287 IGLL3P-201ENST00000412472 434 ntBASIC14.82□□□□□ -0.04
CDH11P55287 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDH11P55287 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.82□□□□□ -0.04
CDH11P55287 AC092183.1-201ENST00000469884 875 ntBASIC14.82□□□□□ -0.04
CDH11P55287 AC087641.1-201ENST00000557561 1021 ntBASIC14.82□□□□□ -0.04
CDH11P55287 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDH11P55287 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms