Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.26■□□□□ 0.19
LIMK2P53671 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.26■□□□□ 0.19
LIMK2P53671 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
LIMK2P53671 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LIMK2P53671 FER1L4-210ENST00000615531 5998 ntBASIC16.26■□□□□ 0.19
LIMK2P53671 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.26■□□□□ 0.19
LIMK2P53671 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.26■□□□□ 0.19
LIMK2P53671 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LIMK2P53671 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LIMK2P53671 TFAMP1-201ENST00000412727 736 ntBASIC16.26■□□□□ 0.19
LIMK2P53671 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.26■□□□□ 0.19
LIMK2P53671 AL627223.1-201ENST00000416693 442 ntBASIC16.26■□□□□ 0.19
LIMK2P53671 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.26■□□□□ 0.19
LIMK2P53671 RN7SL589P-201ENST00000481268 310 ntBASIC16.26■□□□□ 0.19
LIMK2P53671 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.26■□□□□ 0.19
LIMK2P53671 AC109322.1-201ENST00000524499 1264 ntBASIC16.26■□□□□ 0.19
LIMK2P53671 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.26■□□□□ 0.19
LIMK2P53671 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LIMK2P53671 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.26■□□□□ 0.19
LIMK2P53671 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.26■□□□□ 0.19
LIMK2P53671 AL009183.1-201ENST00000603760 355 ntBASIC16.26■□□□□ 0.19
LIMK2P53671 AC009093.7-201ENST00000623853 1223 ntBASIC16.26■□□□□ 0.19
LIMK2P53671 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LIMK2P53671 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.26■□□□□ 0.19
LIMK2P53671 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
LIMK2P53671 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.26■□□□□ 0.19
LIMK2P53671 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LIMK2P53671 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LIMK2P53671 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.25■□□□□ 0.19
LIMK2P53671 AKAP8P1-201ENST00000434743 1349 ntBASIC16.25■□□□□ 0.19
LIMK2P53671 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LIMK2P53671 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 HAUS4P1-201ENST00000406739 1145 ntBASIC16.25■□□□□ 0.19
LIMK2P53671 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.25■□□□□ 0.19
LIMK2P53671 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.25■□□□□ 0.19
LIMK2P53671 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 AC093520.2-201ENST00000561830 333 ntBASIC16.25■□□□□ 0.19
LIMK2P53671 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LIMK2P53671 MIR3197-201ENST00000582241 73 ntBASIC16.25■□□□□ 0.19
LIMK2P53671 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.25■□□□□ 0.19
LIMK2P53671 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.25■□□□□ 0.19
LIMK2P53671 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.25■□□□□ 0.19
LIMK2P53671 AL161645.1-201ENST00000622716 1255 ntBASIC16.25■□□□□ 0.19
LIMK2P53671 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.25■□□□□ 0.19
LIMK2P53671 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.25■□□□□ 0.19
LIMK2P53671 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.25■□□□□ 0.19
LIMK2P53671 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.25■□□□□ 0.19
LIMK2P53671 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIMK2P53671 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.25■□□□□ 0.19
LIMK2P53671 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LIMK2P53671 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.25■□□□□ 0.19
LIMK2P53671 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LIMK2P53671 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.24■□□□□ 0.19
LIMK2P53671 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.24■□□□□ 0.19
LIMK2P53671 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 AC011270.2-201ENST00000624293 2550 ntBASIC16.24■□□□□ 0.19
LIMK2P53671 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms