Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLCN4P51793 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCN4P51793 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCN4P51793 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCN4P51793 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN4P51793 CU634019.7-201ENST00000624153 1185 ntBASIC16.84■□□□□ 0.29
CLCN4P51793 FP236241.2-201ENST00000624906 1185 ntBASIC16.84■□□□□ 0.29
CLCN4P51793 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLCN4P51793 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN4P51793 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN4P51793 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN4P51793 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CLCN4P51793 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN4P51793 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN4P51793 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN4P51793 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN4P51793 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN4P51793 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN4P51793 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN4P51793 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN4P51793 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CLCN4P51793 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLCN4P51793 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLCN4P51793 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.83■□□□□ 0.29
CLCN4P51793 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
CLCN4P51793 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
CLCN4P51793 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN4P51793 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.83■□□□□ 0.29
CLCN4P51793 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN4P51793 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 FAM86MP-201ENST00000340703 885 ntBASIC16.83■□□□□ 0.28
CLCN4P51793 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 RNF216P1-203ENST00000404404 2427 ntBASIC16.83■□□□□ 0.28
CLCN4P51793 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCN4P51793 ACTG1P3-201ENST00000431775 1114 ntBASIC16.83■□□□□ 0.28
CLCN4P51793 TARDBPP1-201ENST00000442013 1203 ntBASIC16.83■□□□□ 0.28
CLCN4P51793 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCN4P51793 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.83■□□□□ 0.28
CLCN4P51793 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.83■□□□□ 0.28
CLCN4P51793 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCN4P51793 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCN4P51793 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCN4P51793 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.83■□□□□ 0.28
CLCN4P51793 MIR5189-201ENST00000577370 114 ntBASIC16.83■□□□□ 0.28
CLCN4P51793 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCN4P51793 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.83■□□□□ 0.28
CLCN4P51793 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.83■□□□□ 0.28
CLCN4P51793 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLCN4P51793 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCN4P51793 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLCN4P51793 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN4P51793 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 FLJ38576-201ENST00000623820 2459 ntBASIC16.82■□□□□ 0.28
CLCN4P51793 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN4P51793 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN4P51793 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN4P51793 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCN4P51793 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN4P51793 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLCN4P51793 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.82■□□□□ 0.28
CLCN4P51793 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.82■□□□□ 0.28
CLCN4P51793 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.82■□□□□ 0.28
CLCN4P51793 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLCN4P51793 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.82■□□□□ 0.28
CLCN4P51793 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCN4P51793 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.82■□□□□ 0.28
CLCN4P51793 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.82■□□□□ 0.28
CLCN4P51793 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.82■□□□□ 0.28
CLCN4P51793 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN4P51793 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN4P51793 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.82■□□□□ 0.28
CLCN4P51793 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.82■□□□□ 0.28
CLCN4P51793 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCN4P51793 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN4P51793 BRI3BPP1-201ENST00000594224 787 ntBASIC16.82■□□□□ 0.28
CLCN4P51793 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCN4P51793 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCN4P51793 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN4P51793 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CLCN4P51793 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms