Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.94□□□□□ -0.18
HCFC1P51610 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
HCFC1P51610 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.94□□□□□ -0.18
HCFC1P51610 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.94□□□□□ -0.18
HCFC1P51610 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HCFC1P51610 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HCFC1P51610 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.94□□□□□ -0.18
HCFC1P51610 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HCFC1P51610 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 KRT8P37-201ENST00000451609 1420 ntBASIC13.94□□□□□ -0.18
HCFC1P51610 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.94□□□□□ -0.18
HCFC1P51610 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 BRWD1P1-201ENST00000401091 371 ntBASIC13.93□□□□□ -0.18
HCFC1P51610 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.93□□□□□ -0.18
HCFC1P51610 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.93□□□□□ -0.18
HCFC1P51610 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.93□□□□□ -0.18
HCFC1P51610 AL583810.1-201ENST00000553344 1045 ntBASIC13.93□□□□□ -0.18
HCFC1P51610 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.93□□□□□ -0.18
HCFC1P51610 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 AC244669.2-201ENST00000612320 853 ntBASIC13.93□□□□□ -0.18
HCFC1P51610 MIR6787-201ENST00000616675 61 ntBASIC13.93□□□□□ -0.18
HCFC1P51610 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 SLC25A47P1-201ENST00000531577 414 ntBASIC13.93□□□□□ -0.18
HCFC1P51610 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 AC124283.3-201ENST00000570869 594 ntBASIC13.93□□□□□ -0.18
HCFC1P51610 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.93□□□□□ -0.18
HCFC1P51610 AL049840.4-201ENST00000602422 811 ntBASIC13.93□□□□□ -0.18
HCFC1P51610 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCFC1P51610 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HCFC1P51610 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
HCFC1P51610 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HCFC1P51610 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.92□□□□□ -0.18
HCFC1P51610 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.92□□□□□ -0.18
HCFC1P51610 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.92□□□□□ -0.18
HCFC1P51610 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.92□□□□□ -0.18
HCFC1P51610 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.92□□□□□ -0.18
HCFC1P51610 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HCFC1P51610 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms