Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KNTC1P50748 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.24■□□□□ 0.03
KNTC1P50748 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.24■□□□□ 0.03
KNTC1P50748 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.24■□□□□ 0.03
KNTC1P50748 AL022328.3-201ENST00000607943 679 ntBASIC15.24■□□□□ 0.03
KNTC1P50748 RHOXF1P1-202ENST00000635473 501 ntBASIC15.24■□□□□ 0.03
KNTC1P50748 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
KNTC1P50748 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KNTC1P50748 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.24■□□□□ 0.03
KNTC1P50748 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.24■□□□□ 0.03
KNTC1P50748 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KNTC1P50748 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KNTC1P50748 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KNTC1P50748 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.23■□□□□ 0.03
KNTC1P50748 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.23■□□□□ 0.03
KNTC1P50748 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.23■□□□□ 0.03
KNTC1P50748 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.23■□□□□ 0.03
KNTC1P50748 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.23■□□□□ 0.03
KNTC1P50748 AC243960.2-201ENST00000600996 747 ntBASIC15.23■□□□□ 0.03
KNTC1P50748 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.23■□□□□ 0.03
KNTC1P50748 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.23■□□□□ 0.03
KNTC1P50748 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
KNTC1P50748 AP003680.1-201ENST00000598970 3660 ntBASIC15.23■□□□□ 0.03
KNTC1P50748 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
KNTC1P50748 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 AC092506.1-202ENST00000401022 528 ntBASIC15.23■□□□□ 0.03
KNTC1P50748 AC016694.1-201ENST00000434179 700 ntBASIC15.23■□□□□ 0.03
KNTC1P50748 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.23■□□□□ 0.03
KNTC1P50748 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 ENPP7P5-201ENST00000541031 1031 ntBASIC15.23■□□□□ 0.03
KNTC1P50748 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KNTC1P50748 AC244093.1-201ENST00000610837 814 ntBASIC15.23■□□□□ 0.03
KNTC1P50748 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.23■□□□□ 0.03
KNTC1P50748 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KNTC1P50748 CYP4F24P-201ENST00000586049 1580 ntBASIC15.22■□□□□ 0.03
KNTC1P50748 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.22■□□□□ 0.03
KNTC1P50748 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.22■□□□□ 0.03
KNTC1P50748 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KNTC1P50748 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.22■□□□□ 0.03
KNTC1P50748 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.22■□□□□ 0.03
KNTC1P50748 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.22■□□□□ 0.03
KNTC1P50748 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.22■□□□□ 0.03
KNTC1P50748 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
KNTC1P50748 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 AC134915.1-201ENST00000426461 574 ntBASIC15.22■□□□□ 0.03
KNTC1P50748 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
KNTC1P50748 C2orf69P2-201ENST00000562032 1123 ntBASIC15.22■□□□□ 0.03
KNTC1P50748 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KNTC1P50748 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.22■□□□□ 0.03
KNTC1P50748 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KNTC1P50748 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
KNTC1P50748 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms