Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V1AP38606 REXO1L8P-201ENST00000604378 1897 ntBASIC20.33■□□□□ 0.84
ATP6V1AP38606 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V1AP38606 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V1AP38606 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V1AP38606 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V1AP38606 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V1AP38606 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 PHKG1P2-201ENST00000457537 863 ntBASIC20.32■□□□□ 0.84
ATP6V1AP38606 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 C2orf69P2-201ENST00000562032 1123 ntBASIC20.32■□□□□ 0.84
ATP6V1AP38606 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 AC091271.1-201ENST00000611877 1162 ntBASIC20.32■□□□□ 0.84
ATP6V1AP38606 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V1AP38606 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V1AP38606 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V1AP38606 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V1AP38606 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V1AP38606 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP6V1AP38606 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 OR6D1P-202ENST00000641007 5290 ntBASIC20.31■□□□□ 0.84
ATP6V1AP38606 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 DUX4L45-201ENST00000566406 1057 ntBASIC20.31■□□□□ 0.84
ATP6V1AP38606 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V1AP38606 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V1AP38606 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 AC004945.1-201ENST00000416738 983 ntBASIC20.3■□□□□ 0.84
ATP6V1AP38606 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 GNRHR2-203ENST00000581100 1187 ntBASIC20.3■□□□□ 0.84
ATP6V1AP38606 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 AC008687.7-202ENST00000637404 953 ntBASIC20.3■□□□□ 0.84
ATP6V1AP38606 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V1AP38606 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP6V1AP38606 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms