Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.4■■□□□ 1.02
USP6P35125 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
USP6P35125 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
USP6P35125 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
USP6P35125 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
USP6P35125 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
USP6P35125 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC21.4■■□□□ 1.02
USP6P35125 ZNF767P-206ENST00000513792 565 ntBASIC21.4■■□□□ 1.02
USP6P35125 CD74-212ENST00000524315 584 ntTSL 5 BASIC21.4■■□□□ 1.02
USP6P35125 RPL8-205ENST00000527914 551 ntTSL 3 BASIC21.4■■□□□ 1.02
USP6P35125 AC079316.1-201ENST00000548397 411 ntBASIC21.4■■□□□ 1.02
USP6P35125 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC21.4■■□□□ 1.02
USP6P35125 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.4■■□□□ 1.02
USP6P35125 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
USP6P35125 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
USP6P35125 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
USP6P35125 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC21.4■■□□□ 1.02
USP6P35125 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
USP6P35125 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.4■■□□□ 1.02
USP6P35125 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.4■■□□□ 1.02
USP6P35125 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
USP6P35125 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
USP6P35125 LOX-206ENST00000639739 1626 ntTSL 5 BASIC21.4■■□□□ 1.02
USP6P35125 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
USP6P35125 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.4■■□□□ 1.02
USP6P35125 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
USP6P35125 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
USP6P35125 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
USP6P35125 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
USP6P35125 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
USP6P35125 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
USP6P35125 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
USP6P35125 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
USP6P35125 ACKR1-201ENST00000368121 1240 ntBASIC21.39■■□□□ 1.02
USP6P35125 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC21.39■■□□□ 1.02
USP6P35125 RAC2-202ENST00000401529 569 ntTSL 4 BASIC21.39■■□□□ 1.02
USP6P35125 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
USP6P35125 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC21.39■■□□□ 1.02
USP6P35125 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
USP6P35125 AC025279.2-201ENST00000569730 653 ntBASIC21.39■■□□□ 1.02
USP6P35125 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.39■■□□□ 1.02
USP6P35125 AC008687.7-202ENST00000637404 953 ntBASIC21.39■■□□□ 1.02
USP6P35125 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
USP6P35125 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
USP6P35125 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.39■■□□□ 1.02
USP6P35125 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
USP6P35125 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
USP6P35125 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
USP6P35125 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
USP6P35125 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
USP6P35125 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
USP6P35125 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
USP6P35125 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
USP6P35125 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
USP6P35125 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC21.38■■□□□ 1.01
USP6P35125 BRWD1P1-201ENST00000401091 371 ntBASIC21.38■■□□□ 1.01
USP6P35125 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
USP6P35125 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC21.38■■□□□ 1.01
USP6P35125 FAM86HP-204ENST00000513466 959 ntBASIC21.38■■□□□ 1.01
USP6P35125 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
USP6P35125 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.38■■□□□ 1.01
USP6P35125 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
USP6P35125 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
USP6P35125 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.38■■□□□ 1.01
USP6P35125 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.38■■□□□ 1.01
USP6P35125 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
USP6P35125 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC21.38■■□□□ 1.01
USP6P35125 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC21.38■■□□□ 1.01
USP6P35125 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC21.38■■□□□ 1.01
USP6P35125 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC21.38■■□□□ 1.01
USP6P35125 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC21.38■■□□□ 1.01
USP6P35125 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.38■■□□□ 1.01
USP6P35125 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.38■■□□□ 1.01
USP6P35125 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC21.38■■□□□ 1.01
USP6P35125 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
USP6P35125 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USP6P35125 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.37■■□□□ 1.01
USP6P35125 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
USP6P35125 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USP6P35125 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
USP6P35125 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 RPL13AP20-201ENST00000459725 609 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms