Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN6P29350 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN6P29350 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN6P29350 AC140658.5-201ENST00000438532 169 ntBASIC15.3■□□□□ 0.04
PTPN6P29350 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN6P29350 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN6P29350 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
PTPN6P29350 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.3■□□□□ 0.04
PTPN6P29350 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN6P29350 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN6P29350 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 AC091812.2-201ENST00000619081 385 ntBASIC15.3■□□□□ 0.04
PTPN6P29350 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN6P29350 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 AL589702.1-201ENST00000641229 1509 ntBASIC15.3■□□□□ 0.04
PTPN6P29350 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PTPN6P29350 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN6P29350 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PTPN6P29350 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PTPN6P29350 CICP13-201ENST00000422015 2789 ntBASIC15.3■□□□□ 0.04
PTPN6P29350 TNRC18P2-201ENST00000417666 2714 ntBASIC15.3■□□□□ 0.04
PTPN6P29350 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN6P29350 AL513477.1-201ENST00000602865 2407 ntBASIC15.29■□□□□ 0.04
PTPN6P29350 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN6P29350 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN6P29350 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PTPN6P29350 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PTPN6P29350 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PTPN6P29350 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN6P29350 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN6P29350 AL365330.1-201ENST00000607459 531 ntBASIC15.29■□□□□ 0.04
PTPN6P29350 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 AP003680.1-201ENST00000598970 3660 ntBASIC15.29■□□□□ 0.04
PTPN6P29350 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN6P29350 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN6P29350 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PTPN6P29350 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN6P29350 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 TMBIM7P-203ENST00000641617 1718 ntBASIC15.29■□□□□ 0.04
PTPN6P29350 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN6P29350 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN6P29350 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 AC006058.4-201ENST00000624016 1670 ntBASIC15.28■□□□□ 0.04
PTPN6P29350 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN6P29350 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.28■□□□□ 0.04
PTPN6P29350 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PTPN6P29350 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms