Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.54□□□□□ -0.24
LMO1P25800 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 FAM220BP-201ENST00000377689 816 ntBASIC13.54□□□□□ -0.24
LMO1P25800 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.54□□□□□ -0.24
LMO1P25800 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 MIR1233-2-201ENST00000408138 82 ntBASIC13.54□□□□□ -0.24
LMO1P25800 MIR1233-1-201ENST00000408722 82 ntBASIC13.54□□□□□ -0.24
LMO1P25800 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.54□□□□□ -0.24
LMO1P25800 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
LMO1P25800 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.54□□□□□ -0.24
LMO1P25800 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.54□□□□□ -0.24
LMO1P25800 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.54□□□□□ -0.24
LMO1P25800 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.54□□□□□ -0.24
LMO1P25800 AC084121.4-201ENST00000641598 221 ntBASIC13.54□□□□□ -0.24
LMO1P25800 AF228730.8-201ENST00000642140 221 ntBASIC13.54□□□□□ -0.24
LMO1P25800 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LMO1P25800 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LMO1P25800 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.54□□□□□ -0.24
LMO1P25800 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LMO1P25800 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LMO1P25800 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LMO1P25800 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LMO1P25800 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.53□□□□□ -0.24
LMO1P25800 PPT1-215ENST00000641471 2368 ntBASIC13.53□□□□□ -0.24
LMO1P25800 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.53□□□□□ -0.24
LMO1P25800 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.53□□□□□ -0.24
LMO1P25800 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
LMO1P25800 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
LMO1P25800 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LMO1P25800 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LMO1P25800 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.53□□□□□ -0.24
LMO1P25800 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 YBX2P1-201ENST00000394192 760 ntBASIC13.53□□□□□ -0.24
LMO1P25800 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.53□□□□□ -0.24
LMO1P25800 MIR940-201ENST00000401276 94 ntBASIC13.53□□□□□ -0.24
LMO1P25800 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
LMO1P25800 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.53□□□□□ -0.24
LMO1P25800 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.53□□□□□ -0.24
LMO1P25800 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.53□□□□□ -0.24
LMO1P25800 SPDYE11-202ENST00000450699 704 ntBASIC13.53□□□□□ -0.24
LMO1P25800 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.53□□□□□ -0.24
LMO1P25800 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
LMO1P25800 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.53□□□□□ -0.24
LMO1P25800 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.53□□□□□ -0.24
LMO1P25800 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.53□□□□□ -0.24
LMO1P25800 SPDYE9P-201ENST00000570642 692 ntBASIC13.53□□□□□ -0.24
LMO1P25800 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.53□□□□□ -0.24
LMO1P25800 SPDYE10P-202ENST00000612005 668 ntBASIC13.53□□□□□ -0.24
LMO1P25800 SPDYE8P-202ENST00000612377 668 ntBASIC13.53□□□□□ -0.24
LMO1P25800 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.53□□□□□ -0.24
LMO1P25800 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.53□□□□□ -0.24
LMO1P25800 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.53□□□□□ -0.24
LMO1P25800 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.53□□□□□ -0.24
LMO1P25800 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
LMO1P25800 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.53□□□□□ -0.24
LMO1P25800 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO1P25800 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.53□□□□□ -0.24
LMO1P25800 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms