Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NFKB1P19838 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NFKB1P19838 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NFKB1P19838 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.4■□□□□ 0.22
NFKB1P19838 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.4■□□□□ 0.22
NFKB1P19838 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 KRT18P32-201ENST00000424695 1287 ntBASIC16.4■□□□□ 0.22
NFKB1P19838 FAM58DP-201ENST00000428076 619 ntBASIC16.4■□□□□ 0.22
NFKB1P19838 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.4■□□□□ 0.22
NFKB1P19838 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.4■□□□□ 0.22
NFKB1P19838 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.4■□□□□ 0.22
NFKB1P19838 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.4■□□□□ 0.22
NFKB1P19838 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.4■□□□□ 0.22
NFKB1P19838 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
NFKB1P19838 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.4■□□□□ 0.22
NFKB1P19838 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.4■□□□□ 0.22
NFKB1P19838 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NFKB1P19838 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
NFKB1P19838 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NFKB1P19838 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NFKB1P19838 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
NFKB1P19838 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
NFKB1P19838 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.39■□□□□ 0.22
NFKB1P19838 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NFKB1P19838 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.39■□□□□ 0.21
NFKB1P19838 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 AL627223.1-201ENST00000416693 442 ntBASIC16.39■□□□□ 0.21
NFKB1P19838 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.39■□□□□ 0.21
NFKB1P19838 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
NFKB1P19838 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.39■□□□□ 0.21
NFKB1P19838 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.39■□□□□ 0.21
NFKB1P19838 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.39■□□□□ 0.21
NFKB1P19838 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
NFKB1P19838 RARRES2P9-201ENST00000565168 469 ntBASIC16.39■□□□□ 0.21
NFKB1P19838 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.39■□□□□ 0.21
NFKB1P19838 AC055717.3-201ENST00000622967 595 ntBASIC16.39■□□□□ 0.21
NFKB1P19838 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.39■□□□□ 0.21
NFKB1P19838 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NFKB1P19838 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NFKB1P19838 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.39■□□□□ 0.21
NFKB1P19838 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
NFKB1P19838 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 AC011477.6-201ENST00000604980 1927 ntBASIC16.39■□□□□ 0.21
NFKB1P19838 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFKB1P19838 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NFKB1P19838 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NFKB1P19838 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 AL162727.3-201ENST00000635661 2787 ntBASIC16.38■□□□□ 0.21
NFKB1P19838 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NFKB1P19838 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NFKB1P19838 AL691432.1-201ENST00000596308 1422 ntBASIC16.38■□□□□ 0.21
NFKB1P19838 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.38■□□□□ 0.21
NFKB1P19838 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NFKB1P19838 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.38■□□□□ 0.21
NFKB1P19838 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.38■□□□□ 0.21
NFKB1P19838 AC211486.1-202ENST00000416371 468 ntBASIC16.38■□□□□ 0.21
NFKB1P19838 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.38■□□□□ 0.21
NFKB1P19838 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 AC211476.1-201ENST00000503899 468 ntBASIC16.38■□□□□ 0.21
NFKB1P19838 AP000344.2-201ENST00000512987 629 ntBASIC16.38■□□□□ 0.21
NFKB1P19838 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.38■□□□□ 0.21
NFKB1P19838 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.38■□□□□ 0.21
NFKB1P19838 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.38■□□□□ 0.21
NFKB1P19838 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.38■□□□□ 0.21
NFKB1P19838 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
NFKB1P19838 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms