Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.89□□□□□ -0.19
ACAA1P09110 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.89□□□□□ -0.19
ACAA1P09110 MIR648-201ENST00000385046 94 ntBASIC13.89□□□□□ -0.19
ACAA1P09110 AC002056.1-201ENST00000395613 760 ntBASIC13.89□□□□□ -0.19
ACAA1P09110 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.89□□□□□ -0.19
ACAA1P09110 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.89□□□□□ -0.19
ACAA1P09110 AC093724.1-201ENST00000448659 1027 ntBASIC13.89□□□□□ -0.19
ACAA1P09110 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.89□□□□□ -0.19
ACAA1P09110 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.89□□□□□ -0.19
ACAA1P09110 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.89□□□□□ -0.19
ACAA1P09110 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.89□□□□□ -0.19
ACAA1P09110 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.89□□□□□ -0.19
ACAA1P09110 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.89□□□□□ -0.19
ACAA1P09110 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.89□□□□□ -0.19
ACAA1P09110 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ACAA1P09110 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.89□□□□□ -0.19
ACAA1P09110 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.89□□□□□ -0.19
ACAA1P09110 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ACAA1P09110 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ACAA1P09110 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.89□□□□□ -0.19
ACAA1P09110 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
ACAA1P09110 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ACAA1P09110 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ACAA1P09110 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ACAA1P09110 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ACAA1P09110 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
ACAA1P09110 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
ACAA1P09110 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.88□□□□□ -0.19
ACAA1P09110 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.88□□□□□ -0.19
ACAA1P09110 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.88□□□□□ -0.19
ACAA1P09110 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.88□□□□□ -0.19
ACAA1P09110 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 AP002472.1-201ENST00000577490 586 ntBASIC13.88□□□□□ -0.19
ACAA1P09110 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.88□□□□□ -0.19
ACAA1P09110 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ACAA1P09110 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ACAA1P09110 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 WASH6P-202ENST00000359512 1437 ntBASIC13.88□□□□□ -0.19
ACAA1P09110 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.88□□□□□ -0.19
ACAA1P09110 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ACAA1P09110 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ACAA1P09110 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ACAA1P09110 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ACAA1P09110 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ACAA1P09110 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ACAA1P09110 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ACAA1P09110 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.87□□□□□ -0.19
ACAA1P09110 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ACAA1P09110 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ACAA1P09110 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ACAA1P09110 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
ACAA1P09110 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ACAA1P09110 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms