Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.9■□□□□ 0.3
ERBB2P04626 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.9■□□□□ 0.3
ERBB2P04626 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.9■□□□□ 0.3
ERBB2P04626 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.9■□□□□ 0.3
ERBB2P04626 AC093028.1-201ENST00000622998 982 ntBASIC16.9■□□□□ 0.3
ERBB2P04626 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ERBB2P04626 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.9■□□□□ 0.3
ERBB2P04626 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.9■□□□□ 0.3
ERBB2P04626 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ERBB2P04626 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ERBB2P04626 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ERBB2P04626 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
ERBB2P04626 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ERBB2P04626 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ERBB2P04626 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ERBB2P04626 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.89■□□□□ 0.29
ERBB2P04626 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.89■□□□□ 0.29
ERBB2P04626 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.89■□□□□ 0.29
ERBB2P04626 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.89■□□□□ 0.29
ERBB2P04626 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.89■□□□□ 0.29
ERBB2P04626 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.89■□□□□ 0.29
ERBB2P04626 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.89■□□□□ 0.29
ERBB2P04626 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.89■□□□□ 0.29
ERBB2P04626 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
ERBB2P04626 RN7SL828P-201ENST00000607615 303 ntBASIC16.89■□□□□ 0.29
ERBB2P04626 REXO1L1P-202ENST00000608646 1974 ntBASIC16.89■□□□□ 0.29
ERBB2P04626 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.89■□□□□ 0.29
ERBB2P04626 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.89■□□□□ 0.29
ERBB2P04626 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERBB2P04626 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.88■□□□□ 0.29
ERBB2P04626 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ERBB2P04626 MTND6P24-201ENST00000440466 518 ntBASIC16.88■□□□□ 0.29
ERBB2P04626 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.88■□□□□ 0.29
ERBB2P04626 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 AC004449.1-201ENST00000564240 433 ntBASIC16.88■□□□□ 0.29
ERBB2P04626 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.88■□□□□ 0.29
ERBB2P04626 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERBB2P04626 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.88■□□□□ 0.29
ERBB2P04626 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERBB2P04626 KRT8P37-201ENST00000451609 1420 ntBASIC16.87■□□□□ 0.29
ERBB2P04626 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERBB2P04626 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERBB2P04626 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERBB2P04626 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.87■□□□□ 0.29
ERBB2P04626 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERBB2P04626 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.87■□□□□ 0.29
ERBB2P04626 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms