Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SUPT4H1P2-201ENST00000501248 353 ntBASIC9.8□□□□□ -0.84
APOBP04114 COX5BP1-201ENST00000507622 393 ntBASIC9.8□□□□□ -0.84
APOBP04114 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
APOBP04114 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC9.8□□□□□ -0.84
APOBP04114 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 AC141586.1-203ENST00000567242 366 ntBASIC9.8□□□□□ -0.84
APOBP04114 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC9.8□□□□□ -0.84
APOBP04114 INO80C-210ENST00000590757 595 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC9.8□□□□□ -0.84
APOBP04114 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
APOBP04114 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
APOBP04114 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 AL354877.1-201ENST00000424412 413 ntBASIC9.8□□□□□ -0.84
APOBP04114 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 CTBP2P4-201ENST00000513884 920 ntBASIC9.8□□□□□ -0.84
APOBP04114 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC9.8□□□□□ -0.84
APOBP04114 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC9.8□□□□□ -0.84
APOBP04114 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC9.79□□□□□ -0.84
APOBP04114 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
APOBP04114 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC9.79□□□□□ -0.84
APOBP04114 BANP-227ENST00000626016 2144 ntTSL 2 BASIC9.79□□□□□ -0.84
APOBP04114 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
APOBP04114 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
APOBP04114 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
APOBP04114 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC9.79□□□□□ -0.84
APOBP04114 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC9.79□□□□□ -0.84
APOBP04114 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC9.79□□□□□ -0.84
APOBP04114 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
APOBP04114 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC9.79□□□□□ -0.84
APOBP04114 AL353726.2-201ENST00000623259 884 ntBASIC9.79□□□□□ -0.84
APOBP04114 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 AL138799.1-201ENST00000448213 1675 ntBASIC9.79□□□□□ -0.84
APOBP04114 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC9.79□□□□□ -0.84
APOBP04114 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC9.79□□□□□ -0.84
APOBP04114 SDHD-202ENST00000525291 790 ntTSL 3 BASIC9.79□□□□□ -0.84
APOBP04114 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC9.79□□□□□ -0.84
APOBP04114 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC9.79□□□□□ -0.84
APOBP04114 AC073413.1-201ENST00000603927 732 ntBASIC9.79□□□□□ -0.84
APOBP04114 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC9.79□□□□□ -0.84
APOBP04114 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC9.79□□□□□ -0.84
APOBP04114 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
APOBP04114 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
APOBP04114 HNRNPA1P63-201ENST00000427917 963 ntBASIC9.79□□□□□ -0.84
APOBP04114 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms