Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.1■□□□□ 0.01
OPN1SWP03999 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
OPN1SWP03999 AL773604.1-201ENST00000617417 272 ntBASIC15.1■□□□□ 0.01
OPN1SWP03999 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.1■□□□□ 0.01
OPN1SWP03999 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.1■□□□□ 0.01
OPN1SWP03999 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.1■□□□□ 0.01
OPN1SWP03999 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
OPN1SWP03999 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.1■□□□□ 0.01
OPN1SWP03999 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPN1SWP03999 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.09■□□□□ 0.01
OPN1SWP03999 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
OPN1SWP03999 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
OPN1SWP03999 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
OPN1SWP03999 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.09■□□□□ 0.01
OPN1SWP03999 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
OPN1SWP03999 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.09■□□□□ 0.01
OPN1SWP03999 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
OPN1SWP03999 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.09■□□□□ 0.01
OPN1SWP03999 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.09■□□□□ 0.01
OPN1SWP03999 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
OPN1SWP03999 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.09■□□□□ 0.01
OPN1SWP03999 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.09■□□□□ 0.01
OPN1SWP03999 RN7SL510P-201ENST00000581311 263 ntBASIC15.09■□□□□ 0.01
OPN1SWP03999 AL009183.1-201ENST00000603760 355 ntBASIC15.09■□□□□ 0.01
OPN1SWP03999 AC116407.3-201ENST00000623905 1129 ntBASIC15.09■□□□□ 0.01
OPN1SWP03999 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.09■□□□□ 0.01
OPN1SWP03999 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
OPN1SWP03999 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
OPN1SWP03999 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
OPN1SWP03999 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPN1SWP03999 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
OPN1SWP03999 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.09■□□□□ 0.01
OPN1SWP03999 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.09■□□□□ 0.01
OPN1SWP03999 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
OPN1SWP03999 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
OPN1SWP03999 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.08■□□□□ 0.01
OPN1SWP03999 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
OPN1SWP03999 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
OPN1SWP03999 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
OPN1SWP03999 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
OPN1SWP03999 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
OPN1SWP03999 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.08■□□□□ 0.01
OPN1SWP03999 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPN1SWP03999 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.08■□□□□ 0
OPN1SWP03999 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPN1SWP03999 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
OPN1SWP03999 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPN1SWP03999 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.08■□□□□ 0
OPN1SWP03999 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
OPN1SWP03999 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.08■□□□□ 0
OPN1SWP03999 HCG4B-203ENST00000450128 991 ntBASIC15.08■□□□□ 0
OPN1SWP03999 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
OPN1SWP03999 KRT18P34-201ENST00000488218 1270 ntBASIC15.08■□□□□ 0
OPN1SWP03999 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.08■□□□□ 0
OPN1SWP03999 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.08■□□□□ 0
OPN1SWP03999 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.08■□□□□ 0
OPN1SWP03999 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.08■□□□□ 0
OPN1SWP03999 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.08■□□□□ 0
OPN1SWP03999 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.08■□□□□ 0
OPN1SWP03999 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPN1SWP03999 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.08■□□□□ 0
OPN1SWP03999 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.08■□□□□ 0
OPN1SWP03999 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPN1SWP03999 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
OPN1SWP03999 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
OPN1SWP03999 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms