Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
APOEP02649 AL353705.2-201ENST00000428243 662 ntBASIC16.92■□□□□ 0.3
APOEP02649 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.92■□□□□ 0.3
APOEP02649 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.92■□□□□ 0.3
APOEP02649 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.92■□□□□ 0.3
APOEP02649 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.92■□□□□ 0.3
APOEP02649 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.92■□□□□ 0.3
APOEP02649 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
APOEP02649 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.92■□□□□ 0.3
APOEP02649 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.92■□□□□ 0.3
APOEP02649 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
APOEP02649 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.92■□□□□ 0.3
APOEP02649 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
APOEP02649 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
APOEP02649 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOEP02649 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.91■□□□□ 0.3
APOEP02649 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
APOEP02649 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
APOEP02649 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 AC003101.2-201ENST00000612557 442 ntBASIC16.91■□□□□ 0.3
APOEP02649 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.91■□□□□ 0.3
APOEP02649 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.91■□□□□ 0.3
APOEP02649 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
APOEP02649 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
APOEP02649 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
APOEP02649 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.91■□□□□ 0.3
APOEP02649 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
APOEP02649 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOEP02649 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
APOEP02649 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.9■□□□□ 0.3
APOEP02649 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
APOEP02649 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.9■□□□□ 0.3
APOEP02649 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
APOEP02649 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
APOEP02649 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
APOEP02649 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
APOEP02649 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.9■□□□□ 0.3
APOEP02649 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.9■□□□□ 0.3
APOEP02649 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.9■□□□□ 0.3
APOEP02649 AC015911.4-201ENST00000588022 1070 ntBASIC16.9■□□□□ 0.3
APOEP02649 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.9■□□□□ 0.3
APOEP02649 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 AC106028.4-201ENST00000614509 607 ntBASIC16.9■□□□□ 0.3
APOEP02649 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.9■□□□□ 0.3
APOEP02649 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOEP02649 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms