Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-2O95096 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-2O95096 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-2O95096 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-2O95096 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NKX2-2O95096 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NKX2-2O95096 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NKX2-2O95096 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-2O95096 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.83□□□□□ -0.04
NKX2-2O95096 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.83□□□□□ -0.04
NKX2-2O95096 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-2O95096 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX2-2O95096 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-2O95096 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.83□□□□□ -0.04
NKX2-2O95096 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
NKX2-2O95096 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
NKX2-2O95096 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX2-2O95096 RN7SL828P-201ENST00000607615 303 ntBASIC14.83□□□□□ -0.04
NKX2-2O95096 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 MIR6080-201ENST00000617359 66 ntBASIC14.83□□□□□ -0.04
NKX2-2O95096 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.83□□□□□ -0.04
NKX2-2O95096 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-2O95096 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
NKX2-2O95096 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-2O95096 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-2O95096 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-2O95096 PRAL-201ENST00000624952 3286 ntBASIC14.83□□□□□ -0.04
NKX2-2O95096 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.82□□□□□ -0.04
NKX2-2O95096 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NKX2-2O95096 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
NKX2-2O95096 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NKX2-2O95096 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 SPDYE17-201ENST00000412399 783 ntBASIC14.82□□□□□ -0.04
NKX2-2O95096 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.82□□□□□ -0.04
NKX2-2O95096 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
NKX2-2O95096 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.82□□□□□ -0.04
NKX2-2O95096 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.82□□□□□ -0.04
NKX2-2O95096 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.82□□□□□ -0.04
NKX2-2O95096 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.82□□□□□ -0.04
NKX2-2O95096 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 AL133215.2-201ENST00000609242 977 ntBASIC14.82□□□□□ -0.04
NKX2-2O95096 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.82□□□□□ -0.04
NKX2-2O95096 AL691403.2-201ENST00000618460 490 ntBASIC14.82□□□□□ -0.04
NKX2-2O95096 LINC00628-201ENST00000628516 1289 ntBASIC14.82□□□□□ -0.04
NKX2-2O95096 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NKX2-2O95096 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.82□□□□□ -0.04
NKX2-2O95096 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.82□□□□□ -0.04
NKX2-2O95096 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NKX2-2O95096 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX2-2O95096 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-2O95096 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NKX2-2O95096 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX2-2O95096 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms