Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.84■□□□□ 0.29
BEST1O76090 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.84■□□□□ 0.29
BEST1O76090 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.84■□□□□ 0.29
BEST1O76090 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST1O76090 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.84■□□□□ 0.29
BEST1O76090 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.84■□□□□ 0.29
BEST1O76090 AC135586.1-201ENST00000539323 574 ntBASIC16.84■□□□□ 0.29
BEST1O76090 AC138761.1-201ENST00000584393 385 ntBASIC16.84■□□□□ 0.29
BEST1O76090 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
BEST1O76090 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST1O76090 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.84■□□□□ 0.29
BEST1O76090 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST1O76090 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
BEST1O76090 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BEST1O76090 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST1O76090 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST1O76090 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST1O76090 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BEST1O76090 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.83■□□□□ 0.28
BEST1O76090 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.83■□□□□ 0.28
BEST1O76090 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST1O76090 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BEST1O76090 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.83■□□□□ 0.28
BEST1O76090 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.83■□□□□ 0.28
BEST1O76090 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.83■□□□□ 0.28
BEST1O76090 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.83■□□□□ 0.28
BEST1O76090 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.83■□□□□ 0.28
BEST1O76090 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST1O76090 AC004461.2-201ENST00000629517 803 ntBASIC16.83■□□□□ 0.28
BEST1O76090 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.83■□□□□ 0.28
BEST1O76090 AP003680.1-201ENST00000598970 3660 ntBASIC16.83■□□□□ 0.28
BEST1O76090 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST1O76090 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST1O76090 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
BEST1O76090 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST1O76090 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
BEST1O76090 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
BEST1O76090 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
BEST1O76090 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST1O76090 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST1O76090 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST1O76090 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 AC074338.1-201ENST00000416825 156 ntBASIC16.82■□□□□ 0.28
BEST1O76090 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.82■□□□□ 0.28
BEST1O76090 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.82■□□□□ 0.28
BEST1O76090 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 AC114501.2-201ENST00000439631 535 ntBASIC16.82■□□□□ 0.28
BEST1O76090 SPTLC1P1-201ENST00000447199 261 ntBASIC16.82■□□□□ 0.28
BEST1O76090 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.82■□□□□ 0.28
BEST1O76090 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.82■□□□□ 0.28
BEST1O76090 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
BEST1O76090 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.82■□□□□ 0.28
BEST1O76090 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
BEST1O76090 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST1O76090 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST1O76090 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms