Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC10.89□□□□□ -0.67
SNCGO76070 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SNCGO76070 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SNCGO76070 HLA-J-202ENST00000469281 1241 ntBASIC10.89□□□□□ -0.67
SNCGO76070 AC083906.2-201ENST00000511578 360 ntBASIC10.89□□□□□ -0.67
SNCGO76070 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC10.89□□□□□ -0.67
SNCGO76070 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC10.89□□□□□ -0.67
SNCGO76070 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC10.89□□□□□ -0.67
SNCGO76070 TK1-204ENST00000590430 683 ntTSL 3 BASIC10.89□□□□□ -0.67
SNCGO76070 AC010240.3-201ENST00000607688 395 ntBASIC10.89□□□□□ -0.67
SNCGO76070 AC110285.5-201ENST00000611501 352 ntBASIC10.89□□□□□ -0.67
SNCGO76070 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 MYC-209ENST00000641252 345 ntBASIC10.89□□□□□ -0.67
SNCGO76070 MEX3B-202ENST00000558133 4333 ntBASIC10.89□□□□□ -0.67
SNCGO76070 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SNCGO76070 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 LINC00167-201ENST00000530583 1419 ntBASIC10.89□□□□□ -0.67
SNCGO76070 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SNCGO76070 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 TCAF1P1-201ENST00000414990 2232 ntBASIC10.89□□□□□ -0.67
SNCGO76070 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SNCGO76070 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 HLA-A-202ENST00000376806 1854 ntBASIC10.89□□□□□ -0.67
SNCGO76070 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
SNCGO76070 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SNCGO76070 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
SNCGO76070 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC10.88□□□□□ -0.67
SNCGO76070 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
SNCGO76070 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SNCGO76070 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
SNCGO76070 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.88□□□□□ -0.67
SNCGO76070 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.88□□□□□ -0.67
SNCGO76070 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC10.88□□□□□ -0.67
SNCGO76070 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 AC011481.3-201ENST00000623895 5594 ntBASIC10.88□□□□□ -0.67
SNCGO76070 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.88□□□□□ -0.67
SNCGO76070 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SNCGO76070 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 KRT18P29-201ENST00000397031 1267 ntBASIC10.88□□□□□ -0.67
SNCGO76070 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SNCGO76070 AC004911.1-201ENST00000416316 871 ntBASIC10.88□□□□□ -0.67
SNCGO76070 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SNCGO76070 AL391256.1-201ENST00000443260 1855 ntBASIC10.88□□□□□ -0.67
SNCGO76070 AC026185.1-201ENST00000445748 174 ntBASIC10.88□□□□□ -0.67
SNCGO76070 RPS2P4-201ENST00000476944 856 ntBASIC10.88□□□□□ -0.67
SNCGO76070 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC10.88□□□□□ -0.67
SNCGO76070 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC10.88□□□□□ -0.67
SNCGO76070 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC10.88□□□□□ -0.67
SNCGO76070 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
SNCGO76070 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC10.88□□□□□ -0.67
SNCGO76070 SLC25A1P4-201ENST00000567977 778 ntBASIC10.88□□□□□ -0.67
SNCGO76070 WWOX-216ENST00000569818 525 ntBASIC10.88□□□□□ -0.67
SNCGO76070 MTDHP1-201ENST00000605323 784 ntBASIC10.88□□□□□ -0.67
SNCGO76070 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC10.88□□□□□ -0.67
SNCGO76070 GXYLT1P5-201ENST00000614548 1189 ntBASIC10.88□□□□□ -0.67
SNCGO76070 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SNCGO76070 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC10.88□□□□□ -0.67
SNCGO76070 INO80E-214ENST00000620599 515 ntTSL 2 BASIC10.88□□□□□ -0.67
SNCGO76070 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SNCGO76070 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms