Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AL031055.1-201ENST00000606362 631 ntBASIC16.91■□□□□ 0.3
OPHN1O60890 AC026120.1-201ENST00000611536 926 ntBASIC16.91■□□□□ 0.3
OPHN1O60890 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.91■□□□□ 0.3
OPHN1O60890 AL136317.3-201ENST00000618497 906 ntBASIC16.91■□□□□ 0.3
OPHN1O60890 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.91■□□□□ 0.3
OPHN1O60890 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
OPHN1O60890 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.91■□□□□ 0.3
OPHN1O60890 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
OPHN1O60890 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.91■□□□□ 0.3
OPHN1O60890 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.9■□□□□ 0.3
OPHN1O60890 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
OPHN1O60890 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
OPHN1O60890 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
OPHN1O60890 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 BASP1P1-201ENST00000430708 665 ntBASIC16.9■□□□□ 0.3
OPHN1O60890 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.9■□□□□ 0.3
OPHN1O60890 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.9■□□□□ 0.3
OPHN1O60890 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
OPHN1O60890 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 DUX4L27-201ENST00000554796 1261 ntBASIC16.9■□□□□ 0.3
OPHN1O60890 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
OPHN1O60890 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPHN1O60890 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
OPHN1O60890 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
OPHN1O60890 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
OPHN1O60890 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
OPHN1O60890 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.89■□□□□ 0.29
OPHN1O60890 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
OPHN1O60890 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
OPHN1O60890 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.89■□□□□ 0.29
OPHN1O60890 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 AC015922.1-201ENST00000421102 1152 ntBASIC16.89■□□□□ 0.29
OPHN1O60890 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.89■□□□□ 0.29
OPHN1O60890 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 SPDYE11-202ENST00000450699 704 ntBASIC16.89■□□□□ 0.29
OPHN1O60890 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.89■□□□□ 0.29
OPHN1O60890 SPDYE9P-201ENST00000570642 692 ntBASIC16.89■□□□□ 0.29
OPHN1O60890 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.89■□□□□ 0.29
OPHN1O60890 AL390955.2-201ENST00000603032 514 ntBASIC16.89■□□□□ 0.29
OPHN1O60890 SPDYE10P-202ENST00000612005 668 ntBASIC16.89■□□□□ 0.29
OPHN1O60890 SPDYE8P-202ENST00000612377 668 ntBASIC16.89■□□□□ 0.29
OPHN1O60890 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
OPHN1O60890 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
OPHN1O60890 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
OPHN1O60890 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
OPHN1O60890 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OPHN1O60890 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.88■□□□□ 0.29
OPHN1O60890 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OPHN1O60890 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.88■□□□□ 0.29
OPHN1O60890 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
OPHN1O60890 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OPHN1O60890 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OPHN1O60890 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
OPHN1O60890 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OPHN1O60890 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms