Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.42□□□□□ -0.1
CXCL13O43927 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.42□□□□□ -0.1
CXCL13O43927 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL13O43927 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.42□□□□□ -0.1
CXCL13O43927 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.42□□□□□ -0.1
CXCL13O43927 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL13O43927 AC011467.4-201ENST00000594891 528 ntBASIC14.42□□□□□ -0.1
CXCL13O43927 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL13O43927 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL13O43927 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CXCL13O43927 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL13O43927 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.42□□□□□ -0.1
CXCL13O43927 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL13O43927 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL13O43927 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 CYP2T1P-202ENST00000641596 2535 ntBASIC14.41□□□□□ -0.1
CXCL13O43927 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.41□□□□□ -0.1
CXCL13O43927 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 AL080243.2-201ENST00000418783 582 ntBASIC14.41□□□□□ -0.1
CXCL13O43927 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.41□□□□□ -0.1
CXCL13O43927 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.41□□□□□ -0.1
CXCL13O43927 TEX28P1-201ENST00000613479 1221 ntBASIC14.41□□□□□ -0.1
CXCL13O43927 TEX28P2-201ENST00000617764 1221 ntBASIC14.41□□□□□ -0.1
CXCL13O43927 AL590560.3-201ENST00000623350 461 ntBASIC14.41□□□□□ -0.1
CXCL13O43927 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.41□□□□□ -0.1
CXCL13O43927 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CXCL13O43927 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
CXCL13O43927 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL13O43927 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
CXCL13O43927 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL13O43927 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CXCL13O43927 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL13O43927 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCL13O43927 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.4□□□□□ -0.1
CXCL13O43927 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CXCL13O43927 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCL13O43927 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CXCL13O43927 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCL13O43927 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCL13O43927 INGX-202ENST00000489074 768 ntBASIC14.4□□□□□ -0.1
CXCL13O43927 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCL13O43927 RNA5SP421-201ENST00000516864 134 ntBASIC14.4□□□□□ -0.1
CXCL13O43927 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCL13O43927 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.4□□□□□ -0.1
CXCL13O43927 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.4□□□□□ -0.1
CXCL13O43927 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCL13O43927 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.4□□□□□ -0.1
CXCL13O43927 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.4□□□□□ -0.1
CXCL13O43927 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCL13O43927 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CXCL13O43927 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCL13O43927 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL13O43927 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.4□□□□□ -0.1
CXCL13O43927 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms