Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2AO43633 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP2AO43633 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP2AO43633 AL096865.1-201ENST00000606796 927 ntBASIC18.11■□□□□ 0.49
CHMP2AO43633 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2AO43633 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CHMP2AO43633 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2AO43633 AC134407.2-201ENST00000625089 1978 ntBASIC18.11■□□□□ 0.49
CHMP2AO43633 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP2AO43633 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP2AO43633 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP2AO43633 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2AO43633 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2AO43633 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHMP2AO43633 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2AO43633 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2AO43633 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2AO43633 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP2AO43633 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CHMP2AO43633 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2AO43633 AL691432.1-201ENST00000596308 1422 ntBASIC18.1■□□□□ 0.49
CHMP2AO43633 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP2AO43633 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2AO43633 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP2AO43633 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2AO43633 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP2AO43633 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 HAUS4P1-201ENST00000406739 1145 ntBASIC18.1■□□□□ 0.49
CHMP2AO43633 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2AO43633 TSSK5P-201ENST00000423978 907 ntBASIC18.1■□□□□ 0.49
CHMP2AO43633 FAM8A3P-201ENST00000427218 844 ntBASIC18.1■□□□□ 0.49
CHMP2AO43633 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.1■□□□□ 0.49
CHMP2AO43633 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.1■□□□□ 0.49
CHMP2AO43633 AC245100.5-201ENST00000452108 331 ntBASIC18.1■□□□□ 0.49
CHMP2AO43633 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2AO43633 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.1■□□□□ 0.49
CHMP2AO43633 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.1■□□□□ 0.49
CHMP2AO43633 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2AO43633 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
CHMP2AO43633 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHMP2AO43633 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2AO43633 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2AO43633 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.1■□□□□ 0.49
CHMP2AO43633 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
CHMP2AO43633 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2AO43633 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHMP2AO43633 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMP2AO43633 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHMP2AO43633 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMP2AO43633 AC004890.2-204ENST00000481968 304 ntBASIC18.09■□□□□ 0.49
CHMP2AO43633 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2AO43633 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CHMP2AO43633 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CHMP2AO43633 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2AO43633 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2AO43633 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2AO43633 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP2AO43633 AP003680.1-201ENST00000598970 3660 ntBASIC18.09■□□□□ 0.49
CHMP2AO43633 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2AO43633 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.08■□□□□ 0.49
CHMP2AO43633 MTHFR-217ENST00000641820 1569 ntBASIC18.08■□□□□ 0.49
CHMP2AO43633 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP2AO43633 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP2AO43633 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.08■□□□□ 0.49
CHMP2AO43633 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms