Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PHGDHO43175 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
PHGDHO43175 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.07■□□□□ 0.16
PHGDHO43175 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PHGDHO43175 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.07■□□□□ 0.16
PHGDHO43175 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 AC068587.6-202ENST00000641839 5619 ntBASIC16.07■□□□□ 0.16
PHGDHO43175 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PHGDHO43175 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.07■□□□□ 0.16
PHGDHO43175 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.07■□□□□ 0.16
PHGDHO43175 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.07■□□□□ 0.16
PHGDHO43175 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.07■□□□□ 0.16
PHGDHO43175 AC002347.1-201ENST00000569543 541 ntBASIC16.07■□□□□ 0.16
PHGDHO43175 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PHGDHO43175 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.07■□□□□ 0.16
PHGDHO43175 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.07■□□□□ 0.16
PHGDHO43175 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.07■□□□□ 0.16
PHGDHO43175 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.07■□□□□ 0.16
PHGDHO43175 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PHGDHO43175 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHGDHO43175 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.06■□□□□ 0.16
PHGDHO43175 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PHGDHO43175 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PHGDHO43175 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.06■□□□□ 0.16
PHGDHO43175 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.06■□□□□ 0.16
PHGDHO43175 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PHGDHO43175 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.06■□□□□ 0.16
PHGDHO43175 WASH6P-202ENST00000359512 1437 ntBASIC16.06■□□□□ 0.16
PHGDHO43175 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PHGDHO43175 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PHGDHO43175 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 TPM4P1-201ENST00000436100 807 ntBASIC16.06■□□□□ 0.16
PHGDHO43175 PRYP6-201ENST00000514804 343 ntBASIC16.06■□□□□ 0.16
PHGDHO43175 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.06■□□□□ 0.16
PHGDHO43175 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.06■□□□□ 0.16
PHGDHO43175 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.06■□□□□ 0.16
PHGDHO43175 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.06■□□□□ 0.16
PHGDHO43175 AL365330.1-201ENST00000607459 531 ntBASIC16.06■□□□□ 0.16
PHGDHO43175 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 AL513190.1-201ENST00000621254 727 ntBASIC16.06■□□□□ 0.16
PHGDHO43175 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.06■□□□□ 0.16
PHGDHO43175 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PHGDHO43175 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PHGDHO43175 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.06■□□□□ 0.16
PHGDHO43175 AC136621.1-201ENST00000624017 2304 ntBASIC16.06■□□□□ 0.16
PHGDHO43175 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.06■□□□□ 0.16
PHGDHO43175 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PHGDHO43175 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms