Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NDUFA1O15239 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 AC005089.1-201ENST00000619486 2241 ntBASIC11.08□□□□□ -0.64
NDUFA1O15239 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.08□□□□□ -0.64
NDUFA1O15239 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.08□□□□□ -0.64
NDUFA1O15239 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 SCARNA2-201ENST00000458748 420 ntBASIC11.08□□□□□ -0.64
NDUFA1O15239 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
NDUFA1O15239 MIR4492-201ENST00000581627 80 ntBASIC11.08□□□□□ -0.64
NDUFA1O15239 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 LINC01711-201ENST00000598340 967 ntBASIC11.08□□□□□ -0.64
NDUFA1O15239 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.08□□□□□ -0.64
NDUFA1O15239 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 GRK6P1-201ENST00000400595 1711 ntBASIC11.08□□□□□ -0.64
NDUFA1O15239 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NDUFA1O15239 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NDUFA1O15239 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 CICP13-201ENST00000422015 2789 ntBASIC11.08□□□□□ -0.64
NDUFA1O15239 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.08□□□□□ -0.64
NDUFA1O15239 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
NDUFA1O15239 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NDUFA1O15239 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NDUFA1O15239 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.08□□□□□ -0.64
NDUFA1O15239 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NDUFA1O15239 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
NDUFA1O15239 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
NDUFA1O15239 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.07□□□□□ -0.64
NDUFA1O15239 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.07□□□□□ -0.64
NDUFA1O15239 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NDUFA1O15239 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.07□□□□□ -0.64
NDUFA1O15239 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 FOSL1P1-201ENST00000511041 816 ntBASIC11.07□□□□□ -0.64
NDUFA1O15239 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.07□□□□□ -0.64
NDUFA1O15239 MPDU1-223ENST00000582151 728 ntBASIC11.07□□□□□ -0.64
NDUFA1O15239 NKAPP1-205ENST00000585790 367 ntBASIC11.07□□□□□ -0.64
NDUFA1O15239 MTDHP3-201ENST00000594186 672 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms