Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
CLIC1O00299 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLIC1O00299 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 RNA5SP415-201ENST00000517246 115 ntBASIC15.23■□□□□ 0.03
CLIC1O00299 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.23■□□□□ 0.03
CLIC1O00299 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.23■□□□□ 0.03
CLIC1O00299 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.23■□□□□ 0.03
CLIC1O00299 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.23■□□□□ 0.03
CLIC1O00299 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.23■□□□□ 0.03
CLIC1O00299 RN7SL510P-201ENST00000581311 263 ntBASIC15.23■□□□□ 0.03
CLIC1O00299 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.23■□□□□ 0.03
CLIC1O00299 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.23■□□□□ 0.03
CLIC1O00299 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 AL031008.1-201ENST00000619963 541 ntBASIC15.23■□□□□ 0.03
CLIC1O00299 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CLIC1O00299 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLIC1O00299 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLIC1O00299 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.23■□□□□ 0.03
CLIC1O00299 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLIC1O00299 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC1O00299 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLIC1O00299 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLIC1O00299 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.22■□□□□ 0.03
CLIC1O00299 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC1O00299 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLIC1O00299 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC1O00299 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 AC140658.5-201ENST00000438532 169 ntBASIC15.22■□□□□ 0.03
CLIC1O00299 AC093909.1-201ENST00000504731 1122 ntBASIC15.22■□□□□ 0.03
CLIC1O00299 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.22■□□□□ 0.03
CLIC1O00299 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.22■□□□□ 0.03
CLIC1O00299 AC002347.1-201ENST00000569543 541 ntBASIC15.22■□□□□ 0.03
CLIC1O00299 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLIC1O00299 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CLIC1O00299 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC1O00299 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC1O00299 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.22■□□□□ 0.03
CLIC1O00299 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLIC1O00299 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC1O00299 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CLIC1O00299 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
CLIC1O00299 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.21■□□□□ 0.03
CLIC1O00299 AP001282.1-201ENST00000531301 1499 ntBASIC15.21■□□□□ 0.03
CLIC1O00299 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.21■□□□□ 0.03
CLIC1O00299 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLIC1O00299 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLIC1O00299 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 AC087481.3-201ENST00000602886 1894 ntBASIC15.21■□□□□ 0.03
CLIC1O00299 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLIC1O00299 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLIC1O00299 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLIC1O00299 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.21■□□□□ 0.03
CLIC1O00299 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 FAAHP1-202ENST00000446499 1238 ntBASIC15.21■□□□□ 0.03
CLIC1O00299 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.21■□□□□ 0.03
CLIC1O00299 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.21■□□□□ 0.03
CLIC1O00299 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CLIC1O00299 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.21■□□□□ 0.03
CLIC1O00299 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC1O00299 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms