Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 YBX1P5-201ENST00000509441 847 ntBASIC12.13□□□□□ -0.47
KNCNA6PVL3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 AC105233.2-201ENST00000523697 349 ntBASIC12.13□□□□□ -0.47
KNCNA6PVL3 AF228730.5-201ENST00000530288 346 ntBASIC12.13□□□□□ -0.47
KNCNA6PVL3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 AC022145.2-201ENST00000598203 171 ntBASIC12.13□□□□□ -0.47
KNCNA6PVL3 AL596442.2-201ENST00000610240 980 ntBASIC12.13□□□□□ -0.47
KNCNA6PVL3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 AC023511.2-201ENST00000618803 211 ntBASIC12.13□□□□□ -0.47
KNCNA6PVL3 AC055717.3-201ENST00000622967 595 ntBASIC12.13□□□□□ -0.47
KNCNA6PVL3 AC105339.1-204ENST00000636249 355 ntBASIC12.13□□□□□ -0.47
KNCNA6PVL3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 MTHFR-217ENST00000641820 1569 ntBASIC12.13□□□□□ -0.47
KNCNA6PVL3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KNCNA6PVL3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.13□□□□□ -0.47
KNCNA6PVL3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 AL589702.1-201ENST00000641229 1509 ntBASIC12.12□□□□□ -0.47
KNCNA6PVL3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 SPTSSB-204ENST00000617024 1292 ntBASIC12.12□□□□□ -0.47
KNCNA6PVL3 AC134684.3-201ENST00000641758 218 ntBASIC12.12□□□□□ -0.47
KNCNA6PVL3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 AL391005.1-201ENST00000623953 2435 ntBASIC12.12□□□□□ -0.47
KNCNA6PVL3 PCDHA1-201ENST00000378133 2726 ntBASIC12.12□□□□□ -0.47
KNCNA6PVL3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.12□□□□□ -0.47
KNCNA6PVL3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KNCNA6PVL3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KNCNA6PVL3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KNCNA6PVL3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.11□□□□□ -0.47
KNCNA6PVL3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
KNCNA6PVL3 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.11□□□□□ -0.47
KNCNA6PVL3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KNCNA6PVL3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KNCNA6PVL3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
KNCNA6PVL3 CICP6-201ENST00000457191 2729 ntBASIC12.11□□□□□ -0.47
KNCNA6PVL3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
KNCNA6PVL3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KNCNA6PVL3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms