Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.39■□□□□ 0.53
TMEM88BA6NKF7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM88BA6NKF7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 AC026316.1-201ENST00000398900 414 ntBASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 RPSAP31-201ENST00000416648 895 ntBASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 AC025181.2-201ENST00000606994 802 ntBASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 AP001065.2-201ENST00000617205 644 ntBASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM88BA6NKF7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 AC005730.2-201ENST00000564549 1184 ntBASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 AL353770.1-201ENST00000614915 403 ntBASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 AC103691.2-201ENST00000618824 433 ntBASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 LINC01144-201ENST00000626198 1710 ntBASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 LETM1P2-201ENST00000597330 2178 ntBASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM88BA6NKF7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM88BA6NKF7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms