Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 CICP24-201ENST00000605464 2705 ntBASIC13.83□□□□□ -0.2
TMEM235A6NFC5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 SART3-203ENST00000546611 1184 ntBASIC13.83□□□□□ -0.2
TMEM235A6NFC5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 AC106881.1-201ENST00000605849 3329 ntBASIC13.83□□□□□ -0.2
TMEM235A6NFC5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM235A6NFC5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 HAUS4P1-201ENST00000406739 1145 ntBASIC13.82□□□□□ -0.2
TMEM235A6NFC5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TMEM235A6NFC5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 TCAF2P1-201ENST00000291129 2421 ntBASIC13.81□□□□□ -0.2
TMEM235A6NFC5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM235A6NFC5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms