Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 HIST3H2BA-201ENST00000436555 524 ntBASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 AC025048.3-201ENST00000590609 569 ntBASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 AC005702.4-201ENST00000618393 416 ntBASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 NKILA-202ENST00000614771 2598 ntBASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 MYCLP2-201ENST00000449268 967 ntBASIC16■□□□□ 0.15
TBC1D3FA6NER0 AC011495.1-201ENST00000498085 584 ntBASIC16■□□□□ 0.15
TBC1D3FA6NER0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3FA6NER0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3FA6NER0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 AC011676.5-201ENST00000624864 2660 ntBASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 AC245100.5-201ENST00000452108 331 ntBASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 INE1-201ENST00000456273 945 ntBASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms