Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 U1.21-201ENST00000580816 167 ntBASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SPCS2P4-201ENST00000436160 681 ntBASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RBPMS2P1-201ENST00000437762 623 ntBASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CNN2P2-201ENST00000443536 909 ntBASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CNN2P3-201ENST00000450201 906 ntBASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC069335.1-201ENST00000489972 472 ntBASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 KRT8P23-201ENST00000560090 1207 ntBASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC093520.2-201ENST00000561830 333 ntBASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC092364.2-202ENST00000597012 1073 ntBASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AL136317.3-201ENST00000618497 906 ntBASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GPAA1P2-202ENST00000606848 1787 ntBASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NORAD-201ENST00000565493 5339 ntBASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CYP2A7P1-201ENST00000595391 815 ntBASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms