Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 ELK2BP-201ENST00000415014 1224 ntBASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 MIR3180-1-201ENST00000580374 94 ntBASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 MIR3180-3-201ENST00000584616 94 ntBASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 MTDHP4-201ENST00000600287 670 ntBASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.2□□□□□ -0.3
DUXBA0A1W2PPF3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 PMS2P4-201ENST00000412466 1052 ntBASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 AC093724.1-201ENST00000448659 1027 ntBASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 AC112693.3-201ENST00000624819 1983 ntBASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
DUXBA0A1W2PPF3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 AC013726.1-201ENST00000563747 2285 ntBASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
DUXBA0A1W2PPF3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms