Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 PMS2P2-201ENST00000425039 1128 ntBASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 SERBP1P3-201ENST00000459980 809 ntBASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 MIR6069-201ENST00000620069 79 ntBASIC15.77■□□□□ 0.12
TRBV5-4A0A0C4DH59 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-4A0A0C4DH59 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-4A0A0C4DH59 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-4A0A0C4DH59 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.77■□□□□ 0.11
TRBV5-4A0A0C4DH59 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-4A0A0C4DH59 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.77■□□□□ 0.11
TRBV5-4A0A0C4DH59 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TRBV5-4A0A0C4DH59 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-4A0A0C4DH59 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-4A0A0C4DH59 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-4A0A0C4DH59 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 TREML5P-201ENST00000421694 576 ntBASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 AL512361.1-201ENST00000554200 418 ntBASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 DUX4L27-201ENST00000554796 1261 ntBASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRBV5-4A0A0C4DH59 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC027369.6-201ENST00000525520 931 ntBASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 ZNF890P-202ENST00000530367 1156 ntBASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 RFPL4AP1-201ENST00000530883 850 ntBASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms