Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 AC126365.1-201ENST00000578585 1514 ntBASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
TRBV5-3A0A0A0MS03 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 RPS8P6-201ENST00000426177 609 ntBASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 AC034105.1-201ENST00000563488 319 ntBASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 AC145285.3-201ENST00000564603 959 ntBASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 AC068137.2-201ENST00000605408 478 ntBASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 AC064836.3-201ENST00000607928 673 ntBASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 LINC01101-201ENST00000622953 1884 ntBASIC15.06■□□□□ 0
TRBV5-3A0A0A0MS03 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.05■□□□□ 0
TRBV5-3A0A0A0MS03 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
TRBV5-3A0A0A0MS03 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRBV5-3A0A0A0MS03 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
TRBV5-3A0A0A0MS03 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.05■□□□□ 0
TRBV5-3A0A0A0MS03 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TRBV5-3A0A0A0MS03 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV5-3A0A0A0MS03 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 AC093909.1-201ENST00000504731 1122 ntBASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 SPTSSB-204ENST00000617024 1292 ntBASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV5-3A0A0A0MS03 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV5-3A0A0A0MS03 AC068418.2-201ENST00000577309 3703 ntBASIC15.04■□□□□ -0
TRBV5-3A0A0A0MS03 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
TRBV5-3A0A0A0MS03 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.04■□□□□ -0
TRBV5-3A0A0A0MS03 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms