Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 CHCHD2P3-201ENST00000603038 451 ntBASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CSNK1G3Q9Y6M4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 RN7SL752P-201ENST00000463779 287 ntBASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 SPDYE18-201ENST00000510091 1050 ntBASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 TPRX2P-201ENST00000535362 881 ntBASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 AC092337.1-201ENST00000568699 1129 ntBASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 AC004790.1-201ENST00000612686 536 ntBASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 AL109936.8-201ENST00000641772 604 ntBASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.76■□□□□ 0.11
CSNK1G3Q9Y6M4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 POU5F1P6-201ENST00000466990 990 ntBASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 GIMAP3P-201ENST00000495150 836 ntBASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms