Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 AL671277.1-201ENST00000429656 993 ntBASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 FAM58CP-201ENST00000435741 640 ntBASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 RARRES2P8-201ENST00000566335 367 ntBASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 AC099522.2-201ENST00000607001 744 ntBASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 AC092902.6-201ENST00000641783 218 ntBASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.83□□□□□ -0.03
TRAPPC4Q9Y296 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAPPC4Q9Y296 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAPPC4Q9Y296 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAPPC4Q9Y296 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.83□□□□□ -0.03
TRAPPC4Q9Y296 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAPPC4Q9Y296 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 AC005829.1-201ENST00000570002 483 ntBASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 AC016027.1-202ENST00000607927 1699 ntBASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAPPC4Q9Y296 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms