Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 RPS2P28-201ENST00000314255 741 ntBASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 KRT18P56-201ENST00000507275 550 ntBASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 IFNL4P1-201ENST00000607083 540 ntBASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 AC020765.3-201ENST00000613051 740 ntBASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 SLC22A20-204ENST00000530038 1673 ntBASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB4Q9UN71 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 AC006449.6-201ENST00000612330 2296 ntBASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 RNPS1P1-201ENST00000507437 918 ntBASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 CLEC4GP1-201ENST00000596555 870 ntBASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 AC008667.4-201ENST00000607370 168 ntBASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 AC005593.1-201ENST00000624894 515 ntBASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGB4Q9UN71 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 KRT18P27-201ENST00000427733 1299 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms