Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 BNIP3P29-201ENST00000598302 571 ntBASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 AC011447.5-201ENST00000616168 564 ntBASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.58■□□□□ 0.41
GTF2IRD1Q9UHL9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
GTF2IRD1Q9UHL9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
GTF2IRD1Q9UHL9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
GTF2IRD1Q9UHL9 PDIA3P1-201ENST00000471856 1510 ntBASIC17.58■□□□□ 0.41
GTF2IRD1Q9UHL9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
GTF2IRD1Q9UHL9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 KRT18P64-201ENST00000434946 1219 ntBASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 TDH-203ENST00000531764 1110 ntBASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2IRD1Q9UHL9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 REXO1L6P-201ENST00000603433 1515 ntBASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
GTF2IRD1Q9UHL9 AP001282.1-201ENST00000531301 1499 ntBASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2IRD1Q9UHL9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms