Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 KRT17P4-201ENST00000429445 819 ntBASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 PCGF3-213ENST00000620529 1899 ntBASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 AC026803.1-201ENST00000569130 274 ntBASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 AC025262.2-201ENST00000623975 1056 ntBASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 HLA-A-202ENST00000376806 1854 ntBASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 RPL8P2-201ENST00000430538 502 ntBASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 AC097359.3-201ENST00000603982 1210 ntBASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 AL162426.1-201ENST00000624141 743 ntBASIC24.79■■□□□ 1.56
RIMBP3Q9UFD9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 AC005622.1-201ENST00000636801 1703 ntBASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 RN7SL258P-201ENST00000478664 300 ntBASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 AC004686.1-201ENST00000605113 538 ntBASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 AC107464.3-201ENST00000609172 737 ntBASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 PCDHB17P-201ENST00000539533 2393 ntBASIC24.78■■□□□ 1.56
RIMBP3Q9UFD9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 LINC02012-201ENST00000608206 1725 ntBASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 LETM1P2-201ENST00000597330 2178 ntBASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
RIMBP3Q9UFD9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 SNORD3B-2-202ENST00000571722 791 ntBASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 AL109837.1-201ENST00000603272 613 ntBASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 AC138466.5-201ENST00000624002 808 ntBASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RIMBP3Q9UFD9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms