Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 PCDHA1-201ENST00000378133 2726 ntBASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 SERBP1P3-201ENST00000459980 809 ntBASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 AC022188.1-201ENST00000620960 1664 ntBASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 SPDYE18-201ENST00000510091 1050 ntBASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.55■□□□□ 0.72
HMG20BQ9P0W2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 AC015922.1-201ENST00000421102 1152 ntBASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 AC135586.1-201ENST00000539323 574 ntBASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms