Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 AP005901.3-202ENST00000581653 237 ntBASIC15.69■□□□□ 0.1
NDE1Q9NXR1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 AC114341.1-201ENST00000618070 349 ntBASIC15.69■□□□□ 0.1
NDE1Q9NXR1 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 AF228730.7-201ENST00000641842 219 ntBASIC15.69■□□□□ 0.1
NDE1Q9NXR1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 RCN1P2-201ENST00000398357 915 ntBASIC15.68■□□□□ 0.1
NDE1Q9NXR1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 CHCHD2P8-201ENST00000429873 447 ntBASIC15.68■□□□□ 0.1
NDE1Q9NXR1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 AL671277.2-201ENST00000458060 996 ntBASIC15.68■□□□□ 0.1
NDE1Q9NXR1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 NTF6B-201ENST00000591913 560 ntBASIC15.68■□□□□ 0.1
NDE1Q9NXR1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.68■□□□□ 0.1
NDE1Q9NXR1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 AC073508.3-201ENST00000619697 1419 ntBASIC15.68■□□□□ 0.1
NDE1Q9NXR1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDE1Q9NXR1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 AC232323.1-201ENST00000540724 2099 ntBASIC15.67■□□□□ 0.1
NDE1Q9NXR1 REXO1L5P-201ENST00000622260 2098 ntBASIC15.67■□□□□ 0.1
NDE1Q9NXR1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.67■□□□□ 0.1
NDE1Q9NXR1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.67■□□□□ 0.1
NDE1Q9NXR1 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 ABCD1P5-201ENST00000445663 754 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms