Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 RNA5SP415-201ENST00000517246 115 ntBASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 IGHV3-22-201ENST00000520721 359 ntBASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 AL161645.1-201ENST00000622716 1255 ntBASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 AC010507.1-201ENST00000633895 436 ntBASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD1Q9NXG2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD1Q9NXG2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD1Q9NXG2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.21■□□□□ 0.02
THUMPD1Q9NXG2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD1Q9NXG2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
THUMPD1Q9NXG2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
THUMPD1Q9NXG2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD1Q9NXG2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD1Q9NXG2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
THUMPD1Q9NXG2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms