Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 AC061975.2-201ENST00000581722 295 ntBASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 AL513477.1-201ENST00000602865 2407 ntBASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LRRC40Q9H9A6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LRRC40Q9H9A6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC40Q9H9A6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 SPCS2P4-201ENST00000436160 681 ntBASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 AC079140.1-201ENST00000508039 487 ntBASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 IGHV3-62-201ENST00000520057 340 ntBASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 KRT8P23-201ENST00000560090 1207 ntBASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 AP000842.3-202ENST00000569238 1080 ntBASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRRC40Q9H9A6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms